[Debian-med-packaging] Bug#754154: ITP: r-bioc-genomicalignments -- BioConductor representation and manipulation of short genomic alignments

Andreas Tille tille at debian.org
Tue Jul 8 08:36:17 UTC 2014


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : r-bioc-genomicalignments
  Version         : 1.0.2
  Upstream Author : Hervè Pagès, Valerie Obenchain, Martin Morgan
* URL             : http://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html
* License         : Artistic-2.0
  Programming Lang: R
  Description     : BioConductor representation and manipulation of short genomic alignments
 This BioConductor package provides efficient containers for storing and
 manipulating short genomic alignments (typically obtained by aligning
 short reads to a reference genome). This includes read counting,
 computing the coverage, junction detection, and working with the
 nucleotide content of the alignments.


Remark: This package is a precondition to upgrade a set of other BioConductor
 packages in Debian.  It is maintained by the Debian Med team at

   svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/



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