[Debian-med-packaging] r-bioc-biocparallel_0.6.1-1_amd64.changes is NEW

[Andreas Tille]

Hi again,

thanks for accepting r-bioc-biocparallel.  Now the last dependency to
fix the bugs below (with the exception of #753224 which is actually
fixed would be

    r-bioc-genomicalignments

which I just uploaded to new.  As said below:  If you need some hint to
adjust your priorities in the queue it would help to accept this package
to continue with the remaining bugs.

Kind regards

       Andreas.

On Mon, Jun 30, 2014 at 06:36:02PM +0200, Andreas Tille wrote:
> Hi ftpmasters,
> 
> I would like to add some additional information to help you in adjusting
> your priorities in new queue (no impatience from my side - just providing
> hopefully helpful information).
> 
> The upstream tarball of this package contains build/BiocParallel.pdf
> which you might stumble upon.  Upstream has just answered my according
> question here:
> 
>    https://lists.alioth.debian.org/pipermail/debian-med-packaging/2014-June/027706.html
>    (and same content basically here
>    https://lists.alioth.debian.org/pipermail/debian-med-packaging/2014-June/027714.html)
> 
> This package is a precondition to finally solve
> 
> #753193 [S|  |  ] [src:r-bioc-cummerbund] r-bioc-cummerbund: FTBFS: ERROR: lazy loading failed for package 'cummeRbund'
> #753217 [S|  |  ] [src:r-bioc-biovizbase] r-bioc-biovizbase: FTBFS: ERROR: lazy loading failed for package 'biovizBase'
> #753224 [S|  |  ] [src:r-bioc-shortread] r-bioc-shortread: FTBFS: alphabet.c:53:5: error: unknown type name 'cachedXStringSet'
> #753233 [S|  |  ] [src:r-bioc-rsamtools] r-bioc-rsamtools: FTBFS: utilities.c:99:5: error: unknown type name 'cachedXVectorList'
> 
> Kind regards and thanks for your work as ftpmaster
> 
>     Andreas.
> 
> PS: Thanks a lot for your superfast processing of velvetoptimiser today!
> 
> 
> On Mon, Jun 30, 2014 at 12:48:47PM +0000, Debian FTP Masters wrote:
> > binary:r-bioc-biocparallel is NEW.
> > source:r-bioc-biocparallel is NEW.
> > 
> > Your package has been put into the NEW queue, which requires manual action
> > from the ftpteam to process. The upload was otherwise valid (it had a good
> > OpenPGP signature and file hashes are valid), so please be patient.
> > 
> > Packages are routinely processed through to the archive, and do feel
> > free to browse the NEW queue[1].
> > 
> > If there is an issue with the upload, you will recieve an email from a
> > member of the ftpteam.
> > 
> > If you have any questions, you may reply to this email.
> > 
> > [1]: https://ftp-master.debian.org/new.html
> > 
> > _______________________________________________
> > Debian-med-packaging mailing list
> > Debian-med-packaging at lists.alioth.debian.org
> > http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging
> > 
> 
> -- 
> http://fam-tille.de

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