[Debian-med-packaging] Bug#754672: qiime: FTBFS on kfreebsd-*: SystemError: Platform not supported by UCLUST

[Cyril Brulebois]

Source: qiime
Version: 1.8.0+dfsg-2
Severity: serious
Justification: FTBFS

Hi,

your package no longer builds on kfreebsd-*:
| Linking FlowgramAli_4frame ...
| cp FlowgramAli_4frame ../../../../scripts/
| make[1]: Leaving directory `/«BUILDDIR»/qiime-1.8.0+dfsg/qiime/support_files/denoiser/FlowgramAlignment'
| FastTree.c: In function 'PosteriorProfile':
| FastTree.c:4726:11: warning: variable 'fAll' set but not used [-Wunused-but-set-variable]
|      float fAll[128][4];
|            ^
| FastTree.c: In function 'PairLogLk':
| FastTree.c:5070:11: warning: variable 'fAll' set but not used [-Wunused-but-set-variable]
|      float fAll[128][4];
|            ^
| FastTree.c: In function 'MLPairOptimize':
| FastTree.c:5973:10: warning: variable 'len5' set but not used [-Wunused-but-set-variable]
|    double len5[5];
|           ^
| Denoiser built.
| FastTree.c downloaded successfully.
| FastTree built.
| Traceback (most recent call last):
|   File "setup.py", line 183, in <module>
|     if download_UCLUST():
|   File "setup.py", line 140, in download_UCLUST
|     raise SystemError, ("Platform not supported by UCLUST")
| SystemError: Platform not supported by UCLUST
| dh_auto_build: python setup.py build --force returned exit code 1

Full build logs:
  https://buildd.debian.org/status/fetch.php?pkg=qiime&arch=kfreebsd-amd64&ver=1.8.0%2Bdfsg-2&stamp=1388360126
  https://buildd.debian.org/status/fetch.php?pkg=qiime&arch=kfreebsd-i386&ver=1.8.0%2Bdfsg-2&stamp=1388359980

Mraw,
KiBi.