[Debian-med-packaging] Bug#753210: bamtools: FTBFS: Patch failed

David Suárez david.sephirot at gmail.com
Sun Jun 29 17:18:07 UTC 2014


Source: bamtools
Version: 2.3.0+dfsg-1
Severity: serious
Tags: jessie sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20140628 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> make[1]: Entering directory '/«BUILDDIR»/bamtools-2.3.0+dfsg'
> # since the upstream build does not create versioned we need to tweak d-shlibmove
> cp /usr/bin/d-shlibmove /«BUILDDIR»/bamtools-2.3.0+dfsg/debian/d-shlibmove
> patch -p0 < debian/d-shlibmove.patch
> patching file debian/d-shlibmove
> Reversed (or previously applied) patch detected!  Assume -R? [n] 
> Apply anyway? [n] 
> Skipping patch.
> 1 out of 1 hunk ignored -- saving rejects to file debian/d-shlibmove.rej
> make[1]: *** [override_dh_install] Error 1

The full build log is available from:
   http://aws-logs.debian.net/ftbfs-logs/2014/06/28/bamtools_2.3.0+dfsg-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.



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