[Debian-med-packaging] Bug#742754: qiime: When installing, get: W: pycompile:160: dangling symlink skipped: /usr/lib/qiime/bin/add_metadata.py

[Steve Lane]

Package: qiime
Version: 1.8.0+dfsg-2
Severity: normal

Dear Maintainer,

When I installed qiime, I got the following:

W: pycompile:160: dangling symlink skipped: /usr/lib/qiime/bin/add_metadata.py (../../../bin/add_biom_metadata)

Note that /usr/bin/add_metadata does exist, and I did have
python-biom-format installed (see below).

Note that I am currently on 1.8, but this error appeared when doing a
clean install of qiime 1.7.

Thanks/best,

--
Steve Lane


-- System Information:
Debian Release: 7.4
  APT prefers stable
  APT policy: (990, 'stable'), (900, 'testing'), (800, 'unstable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-4-amd64 (SMP w/16 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages qiime depends on:
ii  king                2.21.120420-2
ii  libc6               2.18-4
ii  libffi6             3.0.13-12
ii  libgmp10            2:5.0.5+dfsg-2
ii  pynast              1.2-1
ii  python              2.7.5-5
ii  python-biom-format  1.1.2-1
ii  python-cogent       1.5.3-2
ii  python-qcli         0.1.0-1

Versions of packages qiime recommends:
pn  ampliconnoise      <none>
ii  blast2             1:2.2.26.20120620-2
pn  cd-hit             <none>
pn  chimeraslayer      <none>
pn  fasttree           <none>
pn  infernal           <none>
ii  libjs-jquery       1.7.2+dfsg-1
ii  muscle             1:3.8.31-1
ii  python-matplotlib  1.3.1-1+b1
pn  python-mpi4py      <none>
ii  python-numpy       1:1.8.1~rc1-2

Versions of packages qiime suggests:
pn  cytoscape       <none>
pn  rdp-classifier  <none>
pn  t-coffee        <none>
pn  torque-client   <none>

-- no debconf information