[Debian-med-packaging] Bug#746863: insighttoolkit4: ftbfs with GCC-4.9

[Matthias Klose]

Package: src:insighttoolkit4
Version: 4.5.2-1
Severity: important
Tags: sid jessie
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-4.9

The package fails to build in a test rebuild on at least amd64 with
gcc-4.9/g++-4.9, but succeeds to build with gcc-4.8/g++-4.8. The
severity of this report may be raised before the jessie release.

The full build log can be found at:
http://people.debian.org/~doko/logs/failed-gcc49/insighttoolkit4_4.5.2-1_unstable_gcc49.log
The last lines of the build log are at the end of this report.

To build with GCC 4.9, either set CC=gcc-4.9 CXX=g++-4.9 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t experimental install g++ 

Common build failures are new warnings resulting in build failures
with -Werror turned on, or new/dropped symbols in Debian symbols
files.  For other C/C++ related build failures see the porting guide
at http://gcc.gnu.org/gcc-4.9/porting_to.html

[...]
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/52f7bffb5d1b192f105d5d9ccdc1f2ca"
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png
[ 13%] -- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/ee978b644dafb6f52083869e0920d3bf"
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/bcf7707c10a73cf628298a8d56c735b2"
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/0e530c5d9b6b5b2fee1a9f1990dd1e93"
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
[ 13%] -- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/213f0c45c28b08e9e5378a6461c21229"
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
[ 13%] /usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles 
[ 13%] [ 13%] -- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/e90ba239ce39a18e05adc0d0ea1a5d35"
[ 13%] Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png
[ 13%] /usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/36d7a9d90bea0b009c1a069c36df0dc9"
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png -Dname=/«PKGBUILDDIR»/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/73a6e189a50a0cf5d6ebf1b09e2e41d9"
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
Generating /«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png
/usr/bin/cmake -Drelative_top=/«PKGBUILDDIR»/BUILD -Dfile=/«PKGBUILDDIR»/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png -Dname=/«PKGBUILDDIR»/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/«PKGBUILDDIR»/BUILD/ITKData_config.cmake -P /«PKGBUILDDIR»/CMake/ExternalData.cmake
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/5a4f197e05eaeedd822c5d5102dcc3c2"
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/9bd6bcb82c0f55970d3f01879914ad06"
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/85661ff04a90cb6fc505ecd1ae35660d"
-- Found object: "/«PKGBUILDDIR»/.ExternalData/MD5/db2bccff74a4456c841d2bd2b7fb717b"
make[3]: Leaving directory `/«PKGBUILDDIR»/BUILD'
/usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/BUILD/CMakeFiles  13 14 15 16 17 18 19 20 21
[ 13%] Built target ITKData
make[2]: Leaving directory `/«PKGBUILDDIR»/BUILD'
make[1]: *** [all] Error 2
dh_auto_build: make -j10 returned exit code 2
make[1]: Leaving directory `/«PKGBUILDDIR»/BUILD'
make: *** [build-arch] Error 2
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2