[Debian-med-packaging] Bug#746853: gdcm: ftbfs with GCC-4.9

[Mathieu Malaterre]

Control: reassign -1 gccxml 0.9.0+git20140205-1.1
Control: affects -1 src:gdcm

Here is the actual error:

cd /«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/VTK &&
/usr/bin/vtkParseJava --concrete --hints /usr/lib/vtk-5.8/hints -I
/usr/include/vtk-5.8
/«PKGBUILDDIR»/Utilities/VTK/vtkGDCMImageReader.h
/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/VTK/java/vtk/vtkGDCMImageReader.java
/usr/bin/cmake -E cmake_progress_report
/«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles
gccxml_cc1plus: error: gccxml_builtins.h: No such file or directory
[  0%] Java Wrappings - generating vtkGDCMImageWriter.java

re-assigning to gccxml


On Sun, May 4, 2014 at 2:21 AM, Matthias Klose <doko at debian.org> wrote:
> Package: src:gdcm
> Version: 2.4.2-1
> Severity: important
> Tags: sid jessie
> User: debian-gcc at lists.debian.org
> Usertags: ftbfs-gcc-4.9
>
> The package fails to build in a test rebuild on at least amd64 with
> gcc-4.9/g++-4.9, but succeeds to build with gcc-4.8/g++-4.8. The
> severity of this report may be raised before the jessie release.
>
> The full build log can be found at:
> http://people.debian.org/~doko/logs/failed-gcc49/gdcm_2.4.2-1_unstable_gcc49.log
> The last lines of the build log are at the end of this report.
>
> To build with GCC 4.9, either set CC=gcc-4.9 CXX=g++-4.9 explicitly,
> or install the gcc, g++, gfortran, ... packages from experimental.
>
>   apt-get -t experimental install g++
>
> Common build failures are new warnings resulting in build failures
> with -Werror turned on, or new/dropped symbols in Debian symbols
> files.  For other C/C++ related build failures see the porting guide
> at http://gcc.gnu.org/gcc-4.9/porting_to.html
>
> [...]
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_185.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_185.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_185.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_186.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_186.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_186.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_187.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_187.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_187.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_188.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_188.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_188.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_189.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_189.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_189.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_190.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_190.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_190.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_191.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_191.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_191.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_192.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_192.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_192.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_193.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_193.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_193.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_194.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_194.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_194.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_195.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_195.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_195.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_196.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_196.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_196.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_197.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_197.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_197.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_198.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_198.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_198.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_199.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_199.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_199.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_200.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_200.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_200.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_201.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_201.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_201.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_202.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_202.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_202.map"'
> sh: 1: dot: not found
> error: Problems running dot: exit code=127, command='dot', arguments='"/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_203.dot" -Tsvg -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_203.svg" -Tcmapx -o "/«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/inherit_graph_203.map"'
> error: Failed to rename file /«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/gdcmAAbortPDU_8h__incl.svg to /«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/html/gdcmAAbortPDU_8h__incl.svg.tmp!
> cd /«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen && /usr/bin/cmake -E tar cfz /«PKGBUILDDIR»/obj-x86_64-linux-gnu/Utilities/doxygen/gdcm-2.4.2-doc.tar.gz html
> /usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles
> [ 39%] GDCM: Executing GDCMDoxygenDoc
> make[3]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu'
> /usr/bin/cmake -E cmake_progress_report /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles
> [ 39%] Built target GDCMDoxygenDoc
> make[2]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu'
> make[1]: *** [all] Error 2
> make[1]: Leaving directory `/«PKGBUILDDIR»/obj-x86_64-linux-gnu'
> dh_auto_build: make -j10 returned exit code 2
> make: *** [build-arch] Error 2
> dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
>