[Debian-med-packaging] Bug#762647: samtools: FTBFS: test suite errors

[Aaron M. Ucko]

Source: samtools
Version: 1.0-1
Severity: serious
Justification: fails to build from source (but built successfully in the past)

The builds of samtools for arm64 and ppc64el both failed because
the first samtools faidx test hit the autobuilders' activity timeout.
Given that these timeouts are generous (300 minutes for arm64, 150 for
ppc64el), I suspect the test managed to hang on those systems.

Meanwhile, the other builds attempted so far all encountered
unexpected test failures -- 2 on kfreebsd-amd64, and 95 each on i386,
kfreebsd-i386, and mipsel.

Could you please take a look?  You can find the logs at
https://buildd.debian.org/status/logs.php?pkg=samtools&ver=1.0-1

Thanks!