[Debian-med-packaging] Samtools fails to build on several architectures [noreply at buildd.debian.org: failed i386 build of samtools 1.0-1]

Charles Plessy plessy at debian.org
Thu Sep 25 00:09:02 UTC 2014


Le Tue, Sep 23, 2014 at 02:44:16PM +0200, Jakub Wilk a écrit :
> 
> "samtools stats" displays help, but only if stdin is a terminal. If
> it is not, it'll read data from it:
> 
>    if ( !bam_fname )
>    {
>        if ( isatty(STDIN_FILENO) )
>            error(NULL);
>        bam_fname = "-";
>    }

Brilliant, many thanks !

The issue was then quickly solved upstream.

    https://github.com/samtools/samtools/issues/300

Have a nice day,

-- 
Charles Plessy
Debian Med packaging team,
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan



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