[Debian-med-packaging] Need a (hopefully) last kick for finalising qualimap

[Andreas Tille]

Hi again,

I became better now by patching pom.xml further and ejml is found now.

But why the local files coming with the source are not found is
mysterious to me ... :-(

Kind regards

       Andreas.

On Wed, Dec 02, 2015 at 03:37:21PM +0100, Andreas Tille wrote:
> Hi Emmanuel,
> 
> On Wed, Dec 02, 2015 at 01:25:24PM +0100, Emmanuel Bourg wrote:
> > Le 2/12/2015 13:18, Andreas Tille a écrit :
> > > "only dependency with system scope can specify systemPath."
> > 
> > Just add <scope>system</scope> where you added <systemPath>.
> > 
> > *kick*
> 
> Done (and pushed) and better but seems not to be final. :-(
> 
> 
> [INFO] ------------------------------------------------------------------------
> [ERROR] BUILD ERROR
> [INFO] ------------------------------------------------------------------------
> [INFO] Failed to resolve artifact.
>         
> Missing:
> ----------
> 1) org.bioinfo:bioinfo-ngs:jar:debian
>         
>   Try downloading the file manually from the project website.
> 
>   Then, install it using the command:.
>       mvn install:install-file -DgroupId=org.bioinfo -DartifactId=bioinfo-ngs -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file
> 
>   Alternatively, if you host your own repository you can deploy the file there:.
>       mvn deploy:deploy-file -DgroupId=org.bioinfo -DartifactId=bioinfo-ngs -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]
> 
>   Path to dependency:.
>   	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
>   	2) org.bioinfo:bioinfo-ngs:jar:debian
> 
> 2) org.bioinfo:bioinfo-commons:jar:debian
> 
>   Try downloading the file manually from the project website.
> 
>   Then, install it using the command:.
>       mvn install:install-file -DgroupId=org.bioinfo -DartifactId=bioinfo-commons -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file
> 
>   Alternatively, if you host your own repository you can deploy the file there:.
>       mvn deploy:deploy-file -DgroupId=org.bioinfo -DartifactId=bioinfo-commons -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]
> 
>   Path to dependency:.
>   	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
>   	2) org.bioinfo:bioinfo-commons:jar:debian
>         
> 3) org.ejml:ejml:jar:debian
>         
>   Try downloading the file manually from the project website.
> 
>   Then, install it using the command:.
>       mvn install:install-file -DgroupId=org.ejml -DartifactId=ejml -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file
> 
>   Alternatively, if you host your own repository you can deploy the file there:.
>       mvn deploy:deploy-file -DgroupId=org.ejml -DartifactId=ejml -Dversion=debian -Dpackaging=jar -Dfile=/path/to/file -Durl=[url] -DrepositoryId=[id]
> 
>   Path to dependency:.
>   	1) org.bioinfo.ngs:qualimap:jar:2.1.3-dev
>   	2) org.ejml:ejml:jar:debian
> 
> 
> 1)+2) are the "own" java files inside the source tree and 3) should come
> from /usr/share/java/EJML.jar (libejml-java package).
> 
> Seems I did not git it right yet. :-(
> 
> Sorry for my constant bothering here
> 
>       Andreas.
> 
> -- 
> http://fam-tille.de

-- 
http://fam-tille.de