[Debian-med-packaging] Bug#797793: samtools update seems to breaks even more tests

[Andreas Tille]

On Mon, Dec 07, 2015 at 09:57:10PM -0800, Afif Elghraoui wrote:
> 
> This error appears like you're somehow using an old version of pysam
> because AlignmentFile was introduced in 0.8.1. Are you sure you're not
> accidentally building with a Jessie chroot (where pysam is at version
> 0.7.7) rather than an Unstable one?

You are probably right - I can not reproduce myself ...
 
> I just made sure my working directory was clean and tried building
> again. It still works for me...

Thanks for the  pointer.  I've uploaded now after tweaking the expected
result a bit to let the single test pass.  Its not nice to do this without
upstream support ( :-( ) but I'm positive there is no harm done.

Kind regards

       Andreas.

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