[Debian-med-packaging] Bug#808424: [Bug#808424: khmer: FTBFS: assumes a real home directory]

[Andreas Tille]

Hi Michael,

I see several suspicious lintian warnings:

Successfully signed dsc and changes files
W: khmer source: dependency-is-not-multi-archified khmer depends on khmer-common (multi-arch: no)
N: 
N:    The package is Multi-Arch "same", but it depends on a package that is
N:    neither Multi-Arch "same" nor "foreign".
N:    
N:    Refer to https://wiki.ubuntu.com/MultiarchSpec for details.
N:    
N:    Severity: normal, Certainty: possible
N:    
N:    Check: group-checks, Type: source
N: 
W: khmer source: dependency-is-not-multi-archified liboxli1 depends on khmer-common (multi-arch: no)
W: khmer source: dependency-is-not-multi-archified liboxli-dev depends on khmer-common (multi-arch: no)
W: liboxli1-dbgsym: wrong-section-according-to-package-name liboxli1-dbgsym => debug
N: 
N:    This package has a name suggesting that it belongs to a section other
N:    than the one it is currently categorized in.
N:    
N:    Severity: normal, Certainty: possible
N:    
N:    Check: fields, Type: binary, udeb, source
N: 
W: liboxli1-dbgsym: empty-binary-package
N: 
N:    This binary package appears to be empty, and its description does not
N:    say that it's a metapackage or a transitional package. This is often due
N:    to problems with updating debhelper *.install files during package
N:    renames or similar problems where installation rules don't put files in
N:    the correct place.
N:    
N:    If the package is deliberately empty, please mention in the package long
N:    description one of the phrases "metapackage", "dummy", "dependency
N:    package", or "empty package".
N:    
N:    Severity: important, Certainty: wild-guess
N:    
N:    Check: files, Type: binary, udeb
N: 
W: khmer-dbgsym: wrong-section-according-to-package-name khmer-dbgsym => debug
W: khmer-dbgsym: empty-binary-package
N: 20 tags overridden (8 errors, 1 warning, 11 info)

Kind regards

      Andreas.

On Mon, Dec 21, 2015 at 07:55:09AM +0000, Michael R. Crusoe wrote:
> Andreas, I've fixed the bug in my recent push to the team's git repository.
> Can you upload?
> 
> On Sun, Dec 20, 2015 at 11:08 AM Michael R. Crusoe <crusoe at ucdavis.edu>
> wrote:
> 
> > Thanks, Mattia. Yeah this was submitted many many months before pbuilder
> > 0.22 was released. I'll fix it right away.
> >
> > On Sun, Dec 20, 2015 at 2:14 AM Mattia Rizzolo <mattia at debian.org> wrote:
> >
> >>
> >> I'm forwarding you this bug report, so you are already aware of this.
> >> ucko filed it while the BTS still doesn't know about the package, so it
> >> went to unknown-package@ :)
> >>
> >> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=808424
> >>
> >> btw, if you used pbuilder to check this, since 0.220 this is enforced
> >> there too (at least by default).
> >>
> >> ----- Forwarded message from "Aaron M. Ucko" <ucko at debian.org> -----
> >>
> >> Date: Sat, 19 Dec 2015 18:40:32 -0500
> >> From: "Aaron M. Ucko" <ucko at debian.org>
> >> To: Debian Bug Tracking System <submit at bugs.debian.org>
> >> Subject: Bug#808424: khmer: FTBFS: assumes a real home directory
> >> X-Mailer: reportbug 6.6.5
> >>
> >> Source: khmer
> >> Version: 2.0+dfsg-1
> >> Severity: serious
> >> Justification: fails to build from source
> >>
> >> Automated builds of khmer have been failing:
> >>
> >>   ln -sf "`pwd`"/.pybuild/pythonX.Y_*/build/khmer/*.so khmer && \
> >>         ./setup.py develop --user && ./setup.py build_sphinx
> >>   running develop
> >>   error: [Errno 13] Permission denied: '/sbuild-nonexistent'
> >>   debian/rules:17: recipe for target 'override_dh_auto_build' failed
> >>   make[1]: *** [override_dh_auto_build] Error 1
> >>   make[1]: Leaving directory '/«BUILDDIR»/khmer-2.0+dfsg'
> >>   debian/rules:14: recipe for target 'build-arch' failed
> >>   make: *** [build-arch] Error 2
> >>
> >> If the "develop --user" step is mandatory, please arrange to run it
> >> (and anything dependent on any resultant setup) with HOME set to some
> >> temporary directory in the build area.
> >>
> >> Thanks!
> >>
> >> ----- End forwarded message -----
> >>
> >> --
> >> regards,
> >>                         Mattia Rizzolo
> >>
> >> GPG Key: 66AE 2B4A FCCF 3F52 DA18  4D18 4B04 3FCD B944 4540      .''`.
> >> more about me:  http://mapreri.org                              : :'  :
> >> Launchpad user: https://launchpad.net/~mapreri                  `. `'`
> >> Debian QA page: https://qa.debian.org/developer.php?login=mattia  `-
> >>
> >

-- 
http://fam-tille.de