[Debian-med-packaging] Bug#762647: samtools: FTBFS: test suite errors

[Aaron M. Ucko]

found 762647 1.2-1
notfixed 762647 1.2-1
thanks

Charles Plessy <plessy at debian.org> writes:

> since version 1.2-1 built fine on arm64 and ppc64el, I am closing this bug.

I'm glad to see those platforms are doing better now, but that was only
part of the problem.  There are still unexpected failures on i386 and
kfreebsd-i386 (though the count's dropped from 95 to 2, a big improvement):

  UNEXPECTED FAIL: Output mismatch for $samtools mpileup -x -F 0.60 -u -f mpileup.ref.fa indels.bam|$filter|awk '/INDEL/'
  
  See FAIL-59.out.1 vs expected/59.out
  UNEXPECTED FAIL: Output mismatch for $samtools mpileup -x -F 0.60 -u -f mpileup.ref.fa indels.cram|$filter|awk '/INDEL/'
  
  See FAIL-59.out.2 vs expected/59.out

Could you please look into them as well?

Thanks!

-- 
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?amu@monk.mit.edu