[Debian-med-packaging] Bug#785357: gasic: Missing python-matplotlib dependency

Navid Fehrenbacher nf at q-leap.de
Fri May 15 07:47:26 UTC 2015


Package: gasic
Version: 0.0.r18-2
Severity: important

Dear Maintainer,

*** Reporter, please consider answering these questions, where appropriate ***

   * What led up to the situation?
apt-get install gasic

   * What exactly did you do (or not do) that was effective (or
     ineffective)?

execute 'quality_check'

   * What was the outcome of this action?

Traceback (most recent call last):
  File "/usr/bin/quality_check", line 36, in <module>
    raise Exception('Import Error: Failed to load matplotlib module. Please install matplotlib properly (http://matplotlib.sourceforge.net/).')
Exception: Import Error: Failed to load matplotlib module. Please install matplotlib properly (http://matplotlib.sourceforge.net/).

   * What outcome did you expect instead?

quality_check 
Usage: quality_check [Options] SAMFILE

Perform a sanity check on the mapping results (SAM file).
....

*** End of the template - remove these template lines ***


-- System Information:
Debian Release: 8.0
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: amd64 (x86_64)

Kernel: Linux 3.12.36-ql-generic-47 (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=ANSI_X3.4-1968) (ignored: LC_ALL set to C)
Shell: /bin/sh linked to /bin/dash
Init: sysvinit (via /sbin/init)

Versions of packages gasic depends on:
ii  bowtie            1.1.1-2
ii  bowtie2           2.2.4-1
ii  bwa               0.7.10-1
ii  python-biopython  1.64+dfsg-5
ii  python-numpy      1:1.8.2-2
ii  python-pysam      0.7.7-1
ii  python-scipy      0.14.1-1
pn  python:any        <none>
ii  seqan-apps        1.4.1+dfsg-2

gasic recommends no packages.

gasic suggests no packages.

-- no debconf information



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