[Debian-med-packaging] Bug#804995: ITP: proteinortho -- Detection of (Co-)orthologs in large-scale protein analysis

Andreas Tille tille at debian.org
Fri Nov 13 08:41:03 UTC 2015


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : proteinortho
  Version         : 5.11
  Upstream Author : Marcus Lechner <lechner at staff.uni-marburg.de>
* URL             : https://www.bioinf.uni-leipzig.de/Software/proteinortho/
* License         : GPL
  Programming Lang: C++, Perl, Python
  Description     : Detection of (Co-)orthologs in large-scale protein analysis
 Proteinortho is a stand-alone tool that is geared towards large datasets
 and makes use of distributed computing techniques when run on multi-core
 hardware. It implements an extended version of the reciprocal best
 alignment heuristic. Proteinortho was applied to compute orthologous
 proteins in the complete set of all 717 eubacterial genomes available at
 NCBI at the beginning of 2009. Authors succeeded identifying thirty
 proteins present in 99% of all bacterial proteomes.


This package is maintained by the Debian Med team at
   git://anonscm.debian.org/debian-med/proteinortho.git



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