[Debian-med-packaging] Bug#797675: ITP: python-pbalign -- maps Pacific Biosciences reads to reference sequences

Afif Elghraoui afif at ghraoui.name
Tue Sep 1 14:09:18 UTC 2015


Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Control: block 787977 by -1

* Package name    : python-pbalign
  Version         : 0.2.0
  Upstream Author : Pacific Biosciences <devnet at pacificbiosciences.com>
* URL             : https://github.com/PacificBiosciences/pbalign
* License         : BSD
  Programming Lang: Python
  Description     : maps Pacific Biosciences reads to reference DNA sequences

pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.

This package is part of the SMRTAnalysis suite and is to be handled by the
Debian Med team.



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