[Debian-med-packaging] BioPython unit tests: Samtools

Andreas Tille andreas at an3as.eu
Wed Sep 23 14:26:34 UTC 2015


Hi Peter,

On Wed, Sep 23, 2015 at 03:01:18PM +0100, Peter Cock wrote:
> Can you confirm which version of samtools is being used?

Recently version 1.2 was packaged for Debian and this is used
in the test.
 
> Many of the options changed from 0.1.19 to 1.3, and backward
> compatibility wasn't always preserved,  so my guess is this is a
> side effect.

This sounds like a possible explanation for this issue.

Kind regards

      Andreas.

-- 
http://fam-tille.de



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