[Debian-med-packaging] Bug#800136: python-mne: FTBFS: /usr/share/openmpi/help-mpi-errors.txt: No such file or directory

[Chris Lamb]

Source: python-mne
Version: 0.8.6+dfsg-2
Severity: serious
Justification: fails to build from source
User: reproducible-builds at lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org

Dear Maintainer,

python-mne fails to build from source in unstable/amd64. On the face of
it you are missing openmpi-common in Build-Depends, but installing this
surfaces a different error in the tests. Here's the build log with the
shipped B-D:

  [..]

     debian/rules override_dh_auto_test
  make[1]: Entering directory '/tmp/buildd/python-mne-0.8.6+dfsg'
  MNE_DONTWRITE_HOME=true MNE_SKIP_SAMPLE_DATASET_TESTS=true
  MNE_FORCE_SERIAL=true MNE_SKIP_NETWORK_TESTS=1 \
    xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24
    -ac +extension GLX +render -noreset" \
    nosetests mne
  Xlib:  extension "RANDR" missing on display ":20".
  /usr/lib/python2.7/dist-packages/pyface/toolkit.py:43:
  DeprecationWarning: Default toolkit will change to 'qt4' in PyFace 5.0
    DeprecationWarning)
  [profitbricks-build1-amd64:49321] [[INVALID],INVALID] ORTE_ERROR_LOG:
  A system-required executable either could not be found or was not
  executable by this user in file ess_singleton_module.c at line 231
  [profitbricks-build1-amd64:49321] [[INVALID],INVALID] ORTE_ERROR_LOG:
  A system-required executable either could not be found or was not
  executable by this user in file ess_singleton_module.c at line 140
  [profitbricks-build1-amd64:49321] [[INVALID],INVALID] ORTE_ERROR_LOG:
  A system-required executable either could not be found or was not
  executable by this user in file runtime/orte_init.c at line 128
  --------------------------------------------------------------------------
  Sorry!  You were supposed to get help about:
      orte_init:startup:internal-failure
  But I couldn't open the help file:
      /usr/share/openmpi/help-orte-runtime: No such file or directory. 
      Sorry!
  --------------------------------------------------------------------------
  --------------------------------------------------------------------------
  Sorry!  You were supposed to get help about:
      mpi_init:startup:internal-failure
  But I couldn't open the help file:
      /usr/share/openmpi/help-mpi-runtime: No such file or directory. 
      Sorry!
  --------------------------------------------------------------------------
  --------------------------------------------------------------------------
  Sorry!  You were supposed to get help about:
      mpi_errors_are_fatal unknown handle
  But I couldn't open the help file:
      /usr/share/openmpi/help-mpi-errors.txt: No such file or directory.
       Sorry!
  --------------------------------------------------------------------------
  --------------------------------------------------------------------------
  Sorry!  You were supposed to get help about:
      ompi mpi abort:cannot guarantee all killed
  But I couldn't open the help file:
      /usr/share/openmpi/help-mpi-runtime.txt: No such file or
      directory.  Sorry!
  --------------------------------------------------------------------------
  debian/rules:18: recipe for target 'override_dh_auto_test' failed
  make[1]: *** [override_dh_auto_test] Error 1
  make[1]: Leaving directory '/tmp/buildd/python-mne-0.8.6+dfsg'
  debian/rules:7: recipe for target 'build' failed
  make: *** [build] Error 2
  dpkg-buildpackage: error: debian/rules build gave error exit status 2

  [..]

The full build log is attached or can be viewed here:

    https://reproducible.debian.net/logs/unstable/amd64/python-mne_0.8.6+dfsg-2.build1.log.gz


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby at debian.org / chris-lamb.co.uk
       `-