[Debian-med-packaging] Bug#820547: ITP: harvest-tools -- archiving and postprocessing for reference-compressed genomic multi-alignments
Andreas Tille
tille at debian.org
Sat Apr 9 18:21:50 UTC 2016
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : harvest-tools
Version : 1.2
Upstream Author : Todd Treangen <treangen+ParSNP at gmail.com>
* URL : https://github.com/marbl/harvest-tools
* License : BSD
Programming Lang: C++, Python
Description : archiving and postprocessing for reference-compressed genomic multi-alignments
HarvestTools is a utility for creating and interfacing with Gingr files,
which are efficient archives that the Harvest Suite uses to store
reference-compressed multi-alignments, phylogenetic trees, filtered
variants and annotations. Though designed for use with Parsnp and Gingr,
HarvestTools can also be used for generic conversion between standard
bioinformatics file formats.
Remark: This package belongs to a wider toolset to deal with genomic
alignments. It will be packaged by the Debian Med team at
https://anonscm.debian.org/git/debian-med/harvest-tools.git
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