[Debian-med-packaging] Bug#820547: ITP: harvest-tools -- archiving and postprocessing for reference-compressed genomic multi-alignments

Andreas Tille tille at debian.org
Sat Apr 9 18:21:50 UTC 2016


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : harvest-tools
  Version         : 1.2
  Upstream Author : Todd Treangen <treangen+ParSNP at gmail.com>
* URL             : https://github.com/marbl/harvest-tools
* License         : BSD
  Programming Lang: C++, Python
  Description     : archiving and postprocessing for reference-compressed genomic multi-alignments
 HarvestTools is a utility for creating and interfacing with Gingr files,
 which are efficient archives that the Harvest Suite uses to store
 reference-compressed multi-alignments, phylogenetic trees, filtered
 variants and annotations. Though designed for use with Parsnp and Gingr,
 HarvestTools can also be used for generic conversion between standard
 bioinformatics file formats.


Remark: This package belongs to a wider toolset to deal with genomic
alignments.  It will be packaged by the Debian Med team at
   https://anonscm.debian.org/git/debian-med/harvest-tools.git



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