[Debian-med-packaging] Bug#833359: ITP: lefse -- determine features of organisms, clades, taxonomic units, genes

Andreas Tille tille at debian.org
Wed Aug 3 13:24:30 UTC 2016


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : lefse
  Version         : 1.0+20160802
  Upstream Author : Nicola Segata <nicola.segata at unitn.it>
* URL             : https://bitbucket.org/biobakery/biobakery/wiki/lefse
* License         : expat
  Programming Lang: Python
  Description     : determine features of organisms, clades, taxonomic units, genes
 LEfSe (Linear discriminant analysis Effect Size) determines the features
 (organisms, clades, operational taxonomic units, genes, or functions)
 most likely to explain differences between classes by coupling standard
 tests for statistical significance with additional tests encoding
 biological consistency and effect relevance.


Remark: This package is a precondition for metaBIT and will be maintained
by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/lefse.git



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