[Debian-med-packaging] Bug#833451: ncbi-blast+: FTBFS with Boost 1.61

Aaron M. Ucko ucko at debian.org
Thu Aug 4 17:38:24 UTC 2016


I wrote:

> The Boost.Test wrapper that many of ncbi-blast+'s unit tests use turns
> out to be incompatible with Boost 1.61, which was just uploaded and
> designated the new default.  (The wrapper relies on Boost.Test
> implementation details, which have generally been under flux lately.)

A closer look indicates that it should be possible to address the
immediate problem by simply pulling in an existing upstream fix that
missed the 2.4.0 release branch because it accidentally didn't go in
with the other Boost 1.59+ compatibility fixes:

https://www.ncbi.nlm.nih.gov/viewvc/v1?view=revision&revision=72392

It will probably also be necessary to take the formal cleanups in

https://www.ncbi.nlm.nih.gov/viewvc/v1?view=revision&revision=72379

for the patch to be able to apply cleanly.  I'll double check that there
aren't further complications, since I'd previously only tested with
versions up through 1.60.

-- 
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/finger/?amu@monk.mit.edu



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