[Debian-med-packaging] Bug#834862: Bug#834862: hisat2: FTBFS on non-x86: -msse2 (and often -m32) unrecognized

Sascha Steinbiss satta at tetrinetsucht.de
Fri Aug 26 06:04:10 UTC 2016


Hi Aaron,

many thanks for the follow-up.

> This change helped, but non-x86 builds are still failing due to the
> unavailability of cpuid.h on other architectures:
> 
>  processor_support.h:17:22: fatal error: cpuid.h: No such file or directory
>   #   include <cpuid.h>
> 
> Could you please conditionalize this directive appropriately?  Also,
> please make sure that any amd64 assembly is conditionalized out in favor
> of portable C/C++ on other architectures.

I’ll see what I can do. However, to be honest I’m not sure I have the time to do porting work on software in which using hardware optimised approaches is probably a main selling point… I would be more than happy to raise the issue with upstream though.

Cheers
Sascha
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