[Debian-med-packaging] Bug#835579: ITP: r-bioc-biomformat -- GNU R interface package for the BIOM file format
Andreas Tille
tille at debian.org
Sat Aug 27 08:57:46 UTC 2016
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : r-bioc-biomformat
Version : 1.0.2
Upstream Author : Paul J. McMurdie <mcmurdie at stanford.edu>
* URL : http://www.bioconductor.org/packages/release/bioc/html/biomformat.html
* License : GPL
Programming Lang: GNU R
Description : GNU R interface package for the BIOM file format
This is an R package for interfacing with the BIOM format. This package
includes basic tools for reading biom-format files, accessing and
subsetting data tables from a biom object (which is more complex than a
single table), as well as limited support for writing a biom-object back
to a biom-format file. The design of this API is intended to match the
Python API and other tools included with the biom-format project, but
with a decidedly "R flavor" that should be familiar to R users. This
includes S4 classes and methods, as well as extensions of common core
functions/methods.
Remark: This package is a precondition for r-bioc-phyloseq and will be
maintained by the Debian Med team at
svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biomformat/trunk/
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