[Debian-med-packaging] Bug#848735: pynast: FTBFS: Test failures

[Lucas Nussbaum]

Source: pynast
Version: 1.2.2-1
Severity: serious
Tags: stretch sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20161219 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
>     aln = align_unaligned_seqs_f(seqs,moltype,params=params)
>   File "/<<PKGBUILDDIR>>/build/lib.linux-x86_64-2.7/pynast/util.py", line 153, in blast_align_unaligned_seqs
>     raise RuntimeError, "bl2seq failed:\n %s" % bl2seq_res
> RuntimeError: bl2seq failed:
>  768
> 
> ----------------------------------------------------------------------
> Ran 30 tests in 1.050s
> 
> FAILED (errors=1)
> 
> Testing /<<PKGBUILDDIR>>/scripts/pynast.
> 
> Failed the following unit tests.
> /<<PKGBUILDDIR>>/tests/test_util.py
> debian/rules:30: recipe for target 'override_dh_auto_test' failed

The full build log is available from:
   http://aws-logs.debian.net/2016/12/19/pynast_1.2.2-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.