[Debian-med-packaging] ITP: spades -- genome assembler for single-cell and isolates data sets
Sascha Steinbiss
sascha at steinbiss.name
Sun Feb 7 08:52:42 UTC 2016
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta at tetrinetsucht.de>
* Package name : spades
Version : 3.6.2
Upstream Author : Saint-Petersburg Academic University <spades.support at bioinf.spbau.ru>
* URL : http://spades.bioinf.spbau.ru
* License : GPL-2
Programming Lang: C++, Python
Description : genome assembler for single-cell and isolates data sets
The SPAdes – St. Petersburg genome assembler is intended for both
standard isolates and single-cell MDA bacteria assemblies. It works
with Illumina or IonTorrent reads and is capable of providing hybrid
assemblies using PacBio and Sanger reads. You can also provide
additional contigs that will be used as long reads.
This package will be maintained by the Debian Med Packaging Team.
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