[Debian-med-packaging] Bug#811154: ITP: poretools -- toolkit for nanopore nucleotide sequencing data

Afif Elghraoui afif at ghraoui.name
Sat Jan 16 07:36:17 UTC 2016


Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>

* Package name    : poretools
  Version         : 0.5.1
  Upstream Author : Aaron Quinlan <arq5x at virginia.edu> & Nick Loman
* URL             : http://poretools.readthedocs.org
* License         : GPL
  Programming Lang: Python
  Description     : toolkit for nanopore nucleotide sequencing data

poretools is a flexible toolkit for exploring datasets generated by
nanopore sequencing devices from MinION for the purposes of quality
control and downstream analysis. Poretools operates directly on the
native FAST5 (a variant of the HDF5 standard) file format produced by
ONT and provides a wealth of format conversion utilities and data
exploration and visualization tools.

This package will be maintained by the Debian Med team.
git://anonscm.debian.org/debian-med/poretools.git
http://anonscm.debian.org/cgit/debian-med/poretools.git



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