[Debian-med-packaging] Bug#829510: ITP: consensuscore2 -- generate consensus sequences for PacBio sequencing data
Afif Elghraoui
afif at debian.org
Sun Jul 3 23:33:13 UTC 2016
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
* Package name : consensuscore2
Version : 0.12.0
Upstream Author : Pacific Biosciences <devnet at pacb.com>
* URL : https://github.com/PacificBiosciences/ConsensusCore2
* License : BSD
Programming Lang: C++, Python
Description : generate consensus sequences for PacBio sequencing data
ConsensusCore2 embodies core C++ routines underlying the Arrow HMM
algorithm for PacBio multi-sequence consensus. Arrow is the successor
to the Quiver model---a CRF model that was embodied in the
ConsensusCore C++ library. Compared to Quiver, the Arrow model is more
statistically principled and easier and more robust to train.
This package will become a Depends or Recommends of the pbgenomicconsensus
package. It will be maintained by the Debian Med team.
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