[Debian-med-packaging] Bug#832754: ITP: adapterremoval -- rapid adapter trimming, identification, and read merging of gene sequences

[Andreas Tille]

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : adapterremoval
  Version         : 2.1.7
  Upstream Author : Mikkel Schubert, Stinus Lindgreen and Ludovic Orlando
* URL             : https://github.com/MikkelSchubert/adapterremoval
* License         : GPL
  Programming Lang: C++
  Description     : rapid adapter trimming, identification, and read merging of gene sequences
 This program searches for and removes remnant adapter sequences from High-
 Throughput Sequencing (HTS) data and (optionally) trims low quality
 bases from the 3' end of reads following adapter removal. AdapterRemoval
 can analyze both single end and paired end data, and can be used to
 merge overlapping paired-ended reads into (longer) consensus sequences.
 Additionally, the AdapterRemoval may be used to recover a consensus
 adapter sequence for paired-ended data, for which this information is
 not available.


Remark: This package is a precondition for the metabit pipeline and will
be maintained by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/adapterremoval.git