[Debian-med-packaging] Bug#813638: step by step

[Karsten Hilbert]

On Fri, Mar 18, 2016 at 12:03:02PM +0100, Gert Wollny wrote:

> I've finally gotten around to check the latest upstreaam code. It seems
> indeed to be the case that and DICOMDIR can be loaded from the command
> line, although I was not able to get the proper image data (but also ot
> from the menu). 

Thanks a lot for your efforts !

> I tried the DICOMDIR from this sample and extracted the images.tar.gz
> in the same subdir. 
> 
>  https://www.creatis.insa-lyon.fr/~jpr/PUBLIC/gdcm/gdcmSampleData/ForSeriesTesting/Perfusion/

When I run "dciodvfy" against that DICOMDIR it doesn't look
good :-)

	Warning - Bad File Meta Information Version Attribute - wrong VR, length or not 0x00,0x01
	Warning - Bad group length - Group 0x2 specified as 0x7b actually 0x84
	(0x0004,0x1220) SQ Directory Record Sequence Error - Tag read failed - Implicit VR encoding even though supposed to be explicit
	Error - Dicom dataset read failed
	Warning - Value dubious for this VR - (0x0010,0x0010) PN Patient's Name  PN [0] = <0> - Retired Person Name form
	Error - Value invalid for this VR - (0x0010,0x0030) DA Patient's Birth Date  DA [0] = <0> - Length invalid for this VR = 1, expected == 8 or 10
	Error - Value invalid for this VR - (0x0010,0x0030) DA Patient's Birth Date  DA - Trailing character invalid for this VR = ' ' (0x20)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Length invalid for this VR = 54, expected <= 16
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '/' (0x2f)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = '.' (0x2e)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = 'd' (0x64)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = 'c' (0x63)
	Error - Value invalid for this VR - (0x0004,0x1500) CS Referenced File ID  CS [0] = </1.3.46.670589.5.2.14.2198403904.1100092395.458763.dcm> - Character invalid for this VR = 'm' (0x6d)
	...

dcentvfy doesn't show better results ...

(both belong to package dicom3tools)

> Anyway, the patch set between the latest tagged upstream and the
> current HEAD is 4000+ lines, so that I asked upstream to tag a new
> release. If this hasn't happened  until after easter, I'll go forward
> with the big patch.

When I am back home I'll risk the scary apt-get dist-upgrade
that's looming over my jessie-halfways-testing so I can test.

Karsten
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