[Debian-med-packaging] Bug#823673: samtools: FTBFS in testing

[Santiago Vila]

Package: samtools
Version: 1.3.1-1
Severity: serious

Dear maintainer:

This package currently fails to build from source in stretch.

------------------------------------------------------------
=== Testing mpileup.reg regressions ===

UNEXPECTED FAIL: Output mismatch for $samtools mpileup -x -d 8500 -B -f mpileup.ref.fa deep.sam|awk '{print $4}'
See FAIL-47.out.1 vs expected/47.out
------------------------------------------------------------

The full build log is attached.

I see that this package required a change recently for htslib 1.3.1.
However, if this only builds now with libhts >= 1.3.1, then the
Build-Depends field should be updated accordingly.

Thanks.
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