[Debian-med-packaging] Bug#824048: Any change in blastp? (Was: Bug#824048: python-biopython: FTBFS: AssertionError: 10 != 1)

[Andreas Tille]

Hi Peter,

since some time the blastp test fails when building the Debian BioPython
package.  I've got  no answer what might be wrong here.  Do you have any
idea which is better than deactivating this specific test for the monent
which would be the only poor idea I'd have?

Please let me know if you need more information.

Kind regards

       Andreas.

On Wed, May 11, 2016 at 10:08:49PM +0200, Andreas Tille wrote:
> On Wed, May 11, 2016 at 05:35:27PM +0100, Chris Lamb wrote:
> > ...
> >   Bio.PDB.Selection docstring test ... ok
> >   ======================================================================
> >   FAIL: test_blastp (test_NCBI_BLAST_tools.Pairwise)
> >   Pairwise BLASTP search
> >   ----------------------------------------------------------------------
> >   Traceback (most recent call last):
> >     File "/home/lamby/temp/cdt.20160511172943.3m3eRDBdi6.python-biopython/python-biopython-1.66+dfsg/.pybuild/pythonX.Y_2.7/build/Tests/test_NCBI_BLAST_tools.py", line 103, in test_blastp
> >       self.assertEqual(10, stdoutdata.count("Query= "))
> >   AssertionError: 10 != 1
> >   
> >   ----------------------------------------------------------------------
> >   Ran 228 tests in 101.627 seconds
> >   
> >   FAILED (failures = 1)
> 
> Does any body know about a recent change in blastp?
> 
> Kind regards
> 
>        Andreas.
> 
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