[Debian-med-packaging] Bug#825461: [Help] Re: Bug#825461: staden: FTBFS in testing

[Jakub Wilk]

* Jakub Wilk <jwilk at debian.org>, 2016-05-27, 10:05:
>gcc -shared -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_NON_CONST  -I/build/staden-2.0.0+b10/./tk_utils -I/build/staden-2.0.0+b10/./Misc -I/build/staden-2.0.0+b10/./tk_utils -I/usr/include -I"/usr/include/tcl8.6/tk-private/generic" -I"/usr/include/tcl8.6/tk-private/unix" -I"/usr/include/tcl8.6/tk-private/generic/ttk" -I"/usr/include/tcl8.6/tcl-private/generic" -I"/usr/include/tcl8.6/tcl-private/unix" -I/build/staden-2.0.0+b10/./seq_utils   -I/build/staden-2.0.0+b10  -DSVN_VERSION="" -fPIC   -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_NON_CONST  -I/build/staden-2.0.0+b10/./tk_utils -I/build/staden-2.0.0+b10/./Misc -I/build/staden-2.0.0+b10/./tk_utils -I/usr/include -I"/usr/include/tcl8.6/tk-private/generic" -I"/usr/include/tcl8.6/tk-private/unix" -I"/usr/include/tcl8.6/tk-private/generic/ttk" -I"/usr/include/tcl8.6/tcl-private/generic" -I"/usr/include/tcl8.6/tcl-private/unix" -I/build/staden-2.0.0+b10/./seq_utils   -I/build/staden-2.0.0+b10  -DSVN_VERSION="" -fPIC  -L/build/staden-2.0.0+b10/lib -Wl,-z,relro -Wl,--export-dynamic  -Wl,-rpath,/usr/lib/staden -o /build/staden-2.0.0+b10/lib/libtk_utils.so  cli_arg.o tclXkeylist.o tclXutil.o tcl_utils.o tcl_debug.o misc.o init.o text_output.o tkRaster.o tkRasterBuiltIn.o sheet.o tkSheet.o tkSheet_common.o trace_print.o postscript.o split.o tkTrace.o tkTraceComp.o tkTraceIO.o tkTraceDisp.o capture.o canvas_box.o ruler_tick.o restriction_enzyme_map.o element_canvas.o container.o container_ruler.o tcl_io_lib.o  -L/usr/lib/x86_64-linux-gnu -lstaden-read -fPIE -pie -Wl,-z,relro -Wl,-z,now -lm -lpthread   -lcurl -lz -L/usr/lib/x86_64-linux-gnu -ltk8.6 -L/usr/lib/x86_64-linux-gnu -ltcl8.6 -lX11 -lXss -lXext -lXft -lfontconfig -lfreetype -lfontconfig  -lpthread -ldl -lz  -lpthread -lieee -lm  -lmisc  -lpng -lz
>
>This is trying to build a shared library with -pie, which is not going 
>to fly. -pie (and -fPIE) is only for executables.
>
>Now, I don't see any mention of pie in debian/rules, or in the old 
>build log, so I guess this flag must have come from a (broken) 
>library.

If you grep for -pie in config.log you get this:

IO_LIB_LDFLAGS='-L/usr/lib/i386-linux-gnu -lstaden-read -fPIE -pie -Wl,-z,relro -Wl,-z,now -lm -lpthread   -lcurl -lz'

which was apparently generated by:

$ io_lib-config --libs
-L/usr/lib/i386-linux-gnu -lstaden-read -fPIE -pie -Wl,-z,relro -Wl,-z,now -lm -lpthread   -lcurl -lz

This will have to be fixed in libstaden-read-dev.

-- 
Jakub Wilk