[Debian-med-packaging] Bug#839320: Bug#839320: gubbins: FTBFS: Tests failures

[Sascha Steinbiss]

Hi all,

can anyone reproduce the failure as indicated in the bug submitter’s build log? My own cowbuilder build (unstable amd64) succeeds at ‘test_change_window_size' but fails at ‘test_robinson_foulds_convergence’ (the latter I have checked with upstream and they are happy to have this test simply disabled).

Cheers
Sascha


> On 1 Oct 2016, at 10:43, Lucas Nussbaum <lucas at debian.org> wrote:
> 
> Source: gubbins
> Version: 2.1.0-1
> Severity: serious
> Tags: stretch sid
> User: debian-qa at lists.debian.org
> Usertags: qa-ftbfs-20160930 qa-ftbfs
> Justification: FTBFS on amd64
> 
> Hi,
> 
> During a rebuild of all packages in sid, your package failed to build on
> amd64.
> 
> Relevant part (hopefully):
>> 
>> ======================================================================
>> ERROR: test_change_window_size (test_external_dependancies.TestExternalDependancies)
>> ----------------------------------------------------------------------
>> Traceback (most recent call last):
>>  File "/<<PKGBUILDDIR>>/python/gubbins/tests/test_external_dependancies.py", line 34, in test_change_window_size
>>    gubbins_runner.parse_and_run()
>>  File "/<<PKGBUILDDIR>>/python/gubbins/common.py", line 263, in parse_and_run
>>    sys.exit("Failed while running RAxML internal sequence reconstruction")
>> SystemExit: Failed while running RAxML internal sequence reconstruction
>> 
>> ----------------------------------------------------------------------
>> Ran 77 tests in 9.197s
>> 
>> FAILED (errors=1)
>> debian/rules:23: recipe for target 'override_dh_auto_test' failed
> 
> If the failure looks somehow time/timezone related:
> Note that this rebuild was performed without the 'tzdata' package
> installed in the chroot. tzdata used be (transitively) part of
> build-essential, but it no longer is. If this package requires it to
> build, it should be added to build-depends. For the release team's
> opinion on this, see
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=836940#185
> 
> The full build log is available from:
>   http://aws-logs.debian.net/2016/09/30/gubbins_2.1.0-1_unstable.log
> 
> A list of current common problems and possible solutions is available at
> http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
> 
> About the archive rebuild: The rebuild was done on EC2 VM instances from
> Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
> failed build was retried once to eliminate random failures.
> 
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