[Debian-med-packaging] Bug#841396: ITP: dascrubber -- alignment-based scrubbing pipeline for DNA sequencing reads

[Afif Elghraoui]

Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>

* Package name    : dascrubber
  Version         : 0~20160601
  Upstream Author : Eugene W. Myers, Jr. <gene.myers at gmail.com>
* URL             : https://github.com/thegenemyers/DASCRUBBER
* License         : BSD
  Programming Lang: C
  Description     : alignment-based scrubbing pipeline for DNA sequencing reads

The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed
to
 * be continuous stretches of the underlying genome (i.e. no unremoved
   adapters and not chimers)
 * have no very low quality stretches (i.e. the error rate never exceeds some
   reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting
of reads.


This package will be maintained by Debian Med.