[Debian-med-packaging] Psortb has errors in Perl testsuite

[Andreas Tille]

Hi Gregor,

On Wed, Apr 19, 2017 at 12:01:34PM +0200, gregor herrmann wrote:
> On Wed, 19 Apr 2017 11:13:46 +0200, Andreas Tille wrote:
> 
> > #   Failed test 'use Bio::Tools::PSort::SVMLoc;'
> > #   at t/svmloc.t line 11.
> > #     Tried to use 'Bio::Tools::PSort::SVMLoc'.
> > #     Error:  Can't load '/build/psortb-3.0.4+dfsg/bio-tools-psort-svmloc/../blib/arch/auto/Bio/Tools/PSort/SVMLoc/SVMLoc.so' for module Bio::Tools::PSort::SVMLoc: /build/psortb-3.0.4+dfsg/bio-tools-psort-svmloc/../blib/arch/auto/Bio/Tools/PSort/SVMLoc/SVMLoc.so: undefined symbol: _ZN7DataSet12getAttributeEi at /usr/lib/x86_64-linux-gnu/perl/5.24/DynaLoader.pm line 187.
> > #  at t/svmloc.t line 11.
> > # Compilation failed in require at t/svmloc.t line 11.
> > # BEGIN failed--compilation aborted at t/svmloc.t line 11.
> 
> "… SVMLoc.so: … undefined symbol: _ZN7DataSet12getAttributeEi at /usr/lib/x86_64-linux-gnu/perl/5.24/DynaLoader.pm line 187."

Ahh, makes sense.  Hmmm, but what now.  How can I know were this symbol
comes from?  I greped the code and the linkes libs but failed.

Kind regards

       Andreas.

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