[Debian-med-packaging] Bug#859111: Bug#859111: Bug#859111: ariba: FTBFS: FAIL: Test run_bowtie2 unsorted

Sascha Steinbiss satta at debian.org
Thu Apr 27 08:34:26 UTC 2017


tags 859111 pending
thanks

> bowtie2 2.3.1 introduced different default values for one of the
> parameters [1], it might be likely that it's connected to that. I
> have contacted upstream

Upstream have added support for Bowtie2 2.3.1 [1] and I can confirm that
the tests -- and hence the build -- are fixed using this latest version.
Updated Debian package currently in experimental, will upload to
unstable once the freeze is over.

Cheers
Sascha

[1] https://github.com/sanger-pathogens/ariba/issues/170

-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 488 bytes
Desc: OpenPGP digital signature
URL: <http://lists.alioth.debian.org/pipermail/debian-med-packaging/attachments/20170427/67eb6a39/attachment.sig>


More information about the Debian-med-packaging mailing list