[Debian-med-packaging] Bug#861529: ITP: libpll -- Phylogenetic Likelihood Library
Andreas Tille
tille at debian.org
Sun Apr 30 10:59:09 UTC 2017
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : libpll
Version : 0.0+20160909
Upstream Author : Tomas Flouri <Tomas.Flouri at h-its.org>
* URL : https://github.com/xflouris/libpll
* License : AFFERO-3
Programming Lang: C
Description : Phylogenetic Likelihood Library
PLL is a highly optimized, parallelized software library to ease the
development of new software tools dealing with phylogenetic inference.
.
Among the functions included in PLL are parsing multiple sequence
alignments (MSA) from PHYLIP and FASTA files, reading Newick trees,
performing topological moves such as SPR and NNI, model optimization,
likelihood evaluation and partitioned analysis by assigning different
substitution models to each partition of the MSA. PLL fully implements
the GTR nucleotide substitution model for DNA data and a number of
models for aminoacid data.
Remark: This package will be maintained by the Debian Med team at
https://anonscm.debian.org/git/debian-med/libpll.git
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