[Debian-med-packaging] Bug#861529: ITP: libpll -- Phylogenetic Likelihood Library

Andreas Tille tille at debian.org
Sun Apr 30 10:59:09 UTC 2017


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : libpll
  Version         : 0.0+20160909
  Upstream Author : Tomas Flouri <Tomas.Flouri at h-its.org>
* URL             : https://github.com/xflouris/libpll
* License         : AFFERO-3
  Programming Lang: C
  Description     : Phylogenetic Likelihood Library
 PLL is a highly optimized, parallelized software library to ease the
 development of new software tools dealing with phylogenetic inference.
 .
 Among the functions included in PLL are parsing multiple sequence
 alignments (MSA) from PHYLIP and FASTA files, reading Newick trees,
 performing topological moves such as SPR and NNI, model optimization,
 likelihood evaluation and partitioned analysis by assigning different
 substitution models to each partition of the MSA. PLL fully implements
 the GTR nucleotide substitution model for DNA data and a number of
 models for aminoacid data.


Remark: This package will be maintained by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/libpll.git



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