[Debian-med-packaging] Bug#871497: ITP: sambamba -- tools for working with SAM/BAM data

Andreas Tille tille at debian.org
Tue Aug 8 14:36:43 UTC 2017


Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : sambamba
  Version         : 0.6.6
  Upstream Author : Artem Tarasov
* URL             : https://github.com/lomereiter/sambamba
* License         : GPL
  Programming Lang: D
  Description     : tools for working with SAM/BAM data
 Sambamba provides tools for
  * Powerful filtering with sambamba view --filter
  * Picard-like SAM header merging in the merge tool
  * Optional for operations on whole BAMs
  * Fast copying of a region to a new file with the slice tool
  * Duplicate marking/removal, using the Picard criteria


Remark: The package is maintained by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/sambamba.git



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