[Debian-med-packaging] Bug#883322: ITP: bitseq -- Bayesian Inference of Transcripts from Sequencing Data

[Andreas Tille]

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : bitseq
  Version         : 0.7.5
  Upstream Author : Peter Glaus <glaus at cs.man.ac.uk>
* URL             : https://github.com/BitSeq/BitSeq
* License         : Artistic
  Programming Lang: C++
  Description     : Bayesian Inference of Transcripts from Sequencing Data
 BitSeq is an application for inferring expression levels of individual
 transcripts from sequencing (RNA-Seq) data and estimating differential
 expression (DE) between conditions. An advantage of this approach is the
 ability to account for both technical uncertainty and intrinsic biological
 variance in order to avoid false DE calls. The technical contribution to the
 uncertainty comes both from finite read-depth and the possibly ambiguous
 mapping of reads to multiple transcripts.


Remark: This program was once provided by BioLinux.  It is now maintained
by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/bitseq.git