[Debian-med-packaging] Bug#780816: Bug#780816: December: tophat

[Fabian Klötzl]

On 04.12.2017 17:33, Andreas Tille wrote:
> Thanks to the test suite we now know that the issue is not solved yet:
> 
> $ sh run-unit-test 
> 
> [2017-12-04 17:28:54] Beginning TopHat run (v2.1.1)
> -----------------------------------------------
> [2017-12-04 17:28:54] Checking for Bowtie
>                   Bowtie version:        2.3.3.1
> Error locating program: samtools_0.1.18
> 
> 
> Unfortunately a grep for this explicite string has several hits.  I
> have no idea what might happen if we replace it by /usr/bin/samtools.

Ah, I took this as a build-only problem. Will look into it.

Fabian