[Debian-med-packaging] Bug#884269: samtools: FTBFS: bam_sort.c:43:10: fatal error: htslib/hts_os.h: No such file or directory

[Andreas Beckmann]

Source: samtools
Version: 1.6-1
Severity: serious
Justification: fails to build from source (but built successfully in the past)

samtools/experimental FTBFS:

https://buildd.debian.org/status/package.php?p=samtools&suite=experimental

gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I.    -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_sort.o bam_sort.c
bam_sort.c:43:10: fatal error: htslib/hts_os.h: No such file or directory
 #include "htslib/hts_os.h"
          ^~~~~~~~~~~~~~~~~
compilation terminated.
Makefile:126: recipe for target 'bam_sort.o' failed
make[2]: *** [bam_sort.o] Error 1


Andreas