[Debian-med-packaging] Bug#855494: mgltools-pmv: runPmv does not start

Andreas Tille tille at debian.org
Sun Feb 19 08:00:07 UTC 2017


Package: mgltools-pmv
Version: 1.5.7-1
Severity: grave
Justification: renders package unusable

Hi,

I intended to reproduce #855485 but I was running into a different
problem:

$ runPmv
Run PMV from  /usr/lib/python2.7/dist-packages/Pmv
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/Pmv/__init__.py", line 378, in runPmv
    from Pmv.moleculeViewer import MoleculeViewer
  File "/usr/lib/python2.7/dist-packages/Pmv/moleculeViewer.py", line 16, in <module>
    from MolKit.molecule import Atom, AtomSet, BondSet, Molecule , MoleculeSet
  File "/usr/lib/python2.7/dist-packages/MolKit/molecule.py", line 26, in <module>
    from numpy.oldnumeric import sum, array, less_equal, take, nonzero, argsort
ImportError: No module named oldnumeric
hit enter to continue

Some kind of splash screen was starting but than the program stopped.

Kind regards

      Andreas.

-- System Information:
Debian Release: 9.0
  APT prefers testing
  APT policy: (501, 'testing'), (50, 'buildd-unstable'), (50, 'unstable'), (5, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.5.0-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages mgltools-pmv depends on:
ii  mgltools-dejavu           1.5.7-1
ii  mgltools-geomutils        1.5.7-1
ii  mgltools-mglutil          1.5.7-2
ii  mgltools-molkit           1.5.7~rc1+cvs.20140424-1
ii  mgltools-opengltk         1.5.7-1
ii  mgltools-scenario2        1.5.7-1
ii  mgltools-support          1.5.7-1
ii  mgltools-utpackages       1.5.7-1
ii  mgltools-viewerframework  1.5.7-1
ii  python-pil.imagetk        4.0.0-4
ii  python-zsi                2.1~a1-4
pn  python:any                <none>

Versions of packages mgltools-pmv recommends:
ii  apbs           1.4-1
ii  autodocktools  1.5.7-1

Versions of packages mgltools-pmv suggests:
pn  mgltools-pmv-test  <none>
pn  mgltools-qslimlib  <none>

-- no debconf information



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