[Debian-med-packaging] Bug#855701: runPmv script does not work

Ömer ÖZYILDIRIM omerozyildirim at hotmail.com
Tue Feb 21 12:31:45 UTC 2017


Followup-For: Bug #855485
Package: mgltools-pmv
Version: 1.5.7~rc1+cvs.20140424-1

Dear Maintainer,

When I try to invoke runPmv script I get an error which I think is about Tkinter library.
Here is a transcript:

$ runPmv
Run PMV from  /usr/lib/python2.7/dist-packages/Pmv
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/Pmv/__init__.py", line 381, in runPmv
    title=title, withShell= not interactive, verbose=False, gui=gui)
  File "/usr/lib/python2.7/dist-packages/Pmv/moleculeViewer.py", line 1026, in __init__
    trapExceptions=trapExceptions)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VF.py", line 387, in __init__
    verbose=verbose)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VFGUI.py", line 444, in __init__
    verbose=verbose,guiMaster=VIEWER_root,)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 586, in __init__
    cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 285, in AddCamera
    c = classCamera(master, screenName, self, num, cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2189, in __init__
    self.AddTrackball()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2583, in AddTrackball
    self.trackball = Trackball(self, size, rscale, tscale, sscale, renorm )
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 88, in __init__
    self.createSpinGui()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 726, in createSpinGui
    callback=self.setWithSpinGui,
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 90, in __init__
    self.createEntries(self.frame)
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 360, in createEntries
    self.f.grid(column=3, rowspan=3)
  File "/usr/lib/python2.7/lib-tk/Tkinter.py", line 2022, in grid_configure
    + self._options(cnf, kw))
TclError: cannot use geometry manager grid inside .139781089293520.139781089294024.139781017157144.139781017220880 which already has slaves managed by pack


-- System Information:
Debian Release: 8.7
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.16.0-4-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages mgltools-pmv depends on:
ii  idle-python2.7                          2.7.9-2+deb8u1
ii  mgltools-dejavu                         1.5.7~rc1+cvs.20140424-1
ii  mgltools-geomutils                      1.5.7~rc1+cvs.20140424-1
ii  mgltools-mglutil                        1.5.7~rc1+cvs.20140424-1
ii  mgltools-molkit                         1.5.7~rc1+cvs.20140424-1
ii  mgltools-opengltk                       1.5.7~rc1+cvs.20140424-1
ii  mgltools-scenario2                      1.5.7~rc1+cvs.20140424-1
ii  mgltools-support                        1.5.7~rc1+cvs.20140424-1
ii  mgltools-utpackages                     1.5.7~rc1+cvs.20140424-1
ii  mgltools-viewerframework                1.5.7~rc1+cvs.20140424-1
ii  python                                  2.7.9-1
ii  python-imaging-tk                       2.6.1-2+deb8u3
ii  python-pil.imagetk [python-imaging-tk]  2.6.1-2+deb8u3
ii  python-zsi                              2.1~a1-3

Versions of packages mgltools-pmv recommends:
ii  apbs           1.4-1
pn  autodocktools  <none>

Versions of packages mgltools-pmv suggests:
pn  mgltools-pmv-test  <none>
pn  mgltools-qslimlib  <none>

-- no debconf information



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