[Debian-med-packaging] Bug#866137: htslib autopkgtest is broken in 1.4.1-2

[Steve Langasek]

Source: htslib
Version: 1.4.1-2
Severity: important

As seen at <https://ci.debian.net/packages/h/htslib/unstable/amd64/>, the
htslib autopkgtest is broken in 1.4.1-2:

adt-run [07:45:16]: test run-unit-test: [-----------------------
gcc -g -O2 -fdebug-prefix-map=/build/htslib-7uSu1n/htslib-1.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bgzip.o bgzip.c
gcc -g -O2 -fdebug-prefix-map=/build/htslib-7uSu1n/htslib-1.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kfunc.o kfunc.c
gcc -g -O2 -fdebug-prefix-map=/build/htslib-7uSu1n/htslib-1.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o knetfile.o knetfile.c
gcc -g -O2 -fdebug-prefix-map=/build/htslib-7uSu1n/htslib-1.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kstring.o kstring.c
gcc -g -O2 -fdebug-prefix-map=/build/htslib-7uSu1n/htslib-1.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -I. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bcf_sr_sort.o bcf_sr_sort.c
make: *** No rule to make target 'cram/pooled_alloc.h', needed by 'bgzf.o'.  Stop.
make: *** Waiting for unfinished jobs....
adt-run [07:45:18]: test run-unit-test: -----------------------]
adt-run [07:45:18]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
run-unit-test        FAIL non-zero exit status 2

Unfortunately Debian does not consider a regressed autopkgtest a blocker for
testing (which would be useful to help us improve the quality of the
release), but Ubuntu does, so FWIW this will block the new htslib from
reaching the next Ubuntu release until fixed.

-- 
Steve Langasek                   Give me a lever long enough and a Free OS
Debian Developer                   to set it on, and I can move the world.
Ubuntu Developer                                    http://www.debian.org/
slangasek at ubuntu.com                                     vorlon at debian.org
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