[Debian-med-packaging] Bug#866365: libbpp-phyl FTBFS on mips/mipsel: test failures
Adrian Bunk
bunk at debian.org
Thu Jun 29 08:16:48 UTC 2017
Source: libbpp-phyl
Version: 2.3.1-1
Severity: serious
https://buildd.debian.org/status/package.php?p=libbpp-phyl&suite=sid
Test 4 always fails, and only on mips/mipsel:
...
Start 4: test_likelihood_clock
3/14 Test #4: test_likelihood_clock ............***Failed 226.51 sec
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\ 7 nodes loaded.
Initializing data structure............: Done.
Number of distinct sites...............: 14
Test model.............................: T92
93.017264552573323044
* initial likelihood...................: 93.0173
Log-likelihood after adding clock......: 93.0173
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75.078278893520362658
* likelihood after full optimization...: 75.0783
Name: Value: Constraint:
_________________________________________________
BrLen0 0.106560 [ 1e-06; 10000]
BrLen1 0.106560 [ 1e-06; 10000]
BrLen2 0.104086 [ 1e-06; 10000]
BrLen3 0.210646 [ 1e-06; 10000]
BrLen4 407.045446 [ 1e-06; 10000]
BrLen5 407.256092 [ 1e-06; 10000]
T92.kappa 0.375070 ]0; +inf[
T92.theta 0.583589 ]1e-06; 0.999999[
Gamma.alpha 0.050000 [ 0.05; +inf[
Incorrect final value.
...
Tests 5,6,11 timeout again in 2.3.1-5 on mips, as slowest
release architecture it might require an even bigger increase
of the timeout?
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