[Debian-med-packaging] Bug#857283: arb-common: broken symlinks: /usr/lib/arb/bin/mafft-*, /etc/arb/inputMasks/format.readme
Pruesse, Elmar A2
ELMAR.PRUESSE at UCDENVER.EDU
Mon Mar 13 22:52:50 UTC 2017
Hi,
FYI: you can disable building those by passing "MAFFTLINKS=" as argument to make (overrides the variable containing the targets with empty string), or patching bin/Makefile accordingly.
Elmar
> On Mar 9, 2017, at 7:38 AM, Andreas Beckmann <anbe at debian.org> wrote:
>
> Package: arb-common
> Version: 6.0.6-1
> Severity: normal
> User: debian-qa at lists.debian.org
> Usertags: piuparts
>
> Hi,
>
> during a test with piuparts I noticed your package ships (or creates)
> a broken symlink.
>
>> From the attached log (scroll to the bottom...):
>
> 2m1.8s ERROR: FAIL: Broken symlinks:
> /usr/lib/arb/bin/mafft-xinsi -> mafft
> /usr/lib/arb/bin/mafft-qinsi -> mafft
> /usr/lib/arb/bin/mafft-nwnsi -> mafft
> /usr/lib/arb/bin/mafft-nwns -> mafft
> /usr/lib/arb/bin/mafft-linsi -> mafft
> /usr/lib/arb/bin/mafft-ginsi -> mafft
> /usr/lib/arb/bin/mafft-fftnsi -> mafft
> /usr/lib/arb/bin/mafft-fftns -> mafft
> /usr/lib/arb/bin/mafft-einsi -> mafft
> /etc/arb/inputMasks/format.readme -> ../help/input_mask_format.hlp
>
> There is /usr/lib/arb/lib/help/input_mask_format.hlp ...
>
>
> cheers,
>
> Andreas
> <arb-common_6.0.6-1.log.gz>
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