[Debian-med-packaging] Bug#863669: seqan-apps: broken symlink on i386: /usr/bin/splazers -> ../lib/seqan/bin/splazers

[Chris Lamb]

tags 863669 + pending patch
thanks

I've uploaded seqan2 2.3.1+dfsg-3.1 to DELAYED/5:
  
  seqan2 (2.3.1+dfsg-3.1) unstable; urgency=medium
  
    * Non-maintainer upload.
    * Fix broken /usr/bin/splazers symlink on 32-bit architectures.
      (Closes: #863669)

The full debdiff is attached.


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby at debian.org / chris-lamb.co.uk
       `-
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diffstat for seqan2-2.3.1+dfsg seqan2-2.3.1+dfsg

 changelog |    8 ++++++++
 rules     |    6 ++++++
 2 files changed, 14 insertions(+)

diff -Nru seqan2-2.3.1+dfsg/debian/changelog seqan2-2.3.1+dfsg/debian/changelog
--- seqan2-2.3.1+dfsg/debian/changelog	2017-01-15 09:34:05.000000000 +0000
+++ seqan2-2.3.1+dfsg/debian/changelog	2017-05-29 22:56:39.000000000 +0100
@@ -1,3 +1,11 @@
+seqan2 (2.3.1+dfsg-3.1) unstable; urgency=medium
+
+  * Non-maintainer upload.
+  * Fix broken /usr/bin/splazers symlink on 32-bit architectures.
+    (Closes: #863669)
+
+ -- Chris Lamb <lamby at debian.org>  Mon, 29 May 2017 22:56:39 +0100
+
 seqan2 (2.3.1+dfsg-3) unstable; urgency=medium
 
   * add patch FWDs, set HOME to fix manpages
diff -Nru seqan2-2.3.1+dfsg/debian/rules seqan2-2.3.1+dfsg/debian/rules
--- seqan2-2.3.1+dfsg/debian/rules	2017-01-15 08:18:48.000000000 +0000
+++ seqan2-2.3.1+dfsg/debian/rules	2017-05-29 22:56:39.000000000 +0100
@@ -96,6 +96,12 @@
 	# we generate only those manpages where binaries are linked to /usr/bin
 	dh_installman
 
+override_dh_link:
+	dh_link
+	# Some binaries (eg. splazer) are not built in 32-bit architectures so
+	# remove their (broken) symlinks.
+	find $(CURDIR)/debian/$(pkgapps)/usr/bin -type l -xtype l -delete
+
 override_dh_fixperms-indep:
 	dh_fixperms
 	for bin in `ls $(CURDIR)/debian/$(pkgapps)/usr/lib/seqan/bin/*.sh` ; do \