[Debian-med-packaging] Bug#878498: snakemake FTBFS with Python 3.6 as default

chrysn chrysn at fsfe.org
Fri Nov 3 11:17:07 UTC 2017


Package: src:snakemake
Followup-For: Bug #878498

The test also fails with the 3.13.3 version in the team repository.

I've had a short look at whether upgrading to 4.3.0 helps (minimal patch
refreshing and new build dependency on python3-configargparse as well as
the unpackaged ratelimiter module), but the same condition shows up
there as well.

I'll probably need to fix this, but as I'm new to snakemake: Will this
need keeping the 3 version around, or can I just go ahead and proceed
with 4.3.0?

Best regards
chrysn

-- System Information:
Debian Release: buster/sid
  APT prefers unstable-debug
  APT policy: (500, 'unstable-debug'), (500, 'unstable'), (1, 'experimental-debug'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 4.14.0-rc7-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8), LANGUAGE=en_GB:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

-- 
To use raw power is to make yourself infinitely vulnerable to greater powers.
  -- Bene Gesserit axiom
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