[Debian-med-packaging] Bug#880248: circlator: FTBFS: Test failures

[Lucas Nussbaum]

Source: circlator
Version: 1.5.1-1
Severity: serious
Tags: buster sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20171030 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
>   File "/<<PKGBUILDDIR>>/circlator/tests/assemble_test.py", line 71, in test_make_canu_command
>     assembler='canu'
>   File "/<<PKGBUILDDIR>>/circlator/assemble.py", line 41, in __init__
>     self.canu = external_progs.make_and_check_prog('canu', verbose=self.verbose, required=True)
>   File "/<<PKGBUILDDIR>>/circlator/external_progs.py", line 81, in make_and_check_prog
>     handle_error('Found ' + name + " but couldn't get version.", raise_error=raise_error)
>   File "/<<PKGBUILDDIR>>/circlator/external_progs.py", line 56, in handle_error
>     raise Error(message + '\nCannot continue')
> circlator.external_progs.Error: Found canu but couldn't get version.
> Cannot continue
> 
> ----------------------------------------------------------------------
> Ran 107 tests in 2.654s
> 
> FAILED (SKIP=6, errors=1)
> debian/rules:12: recipe for target 'override_dh_auto_test' failed

The full build log is available from:
   http://aws-logs.debian.net/2017/10/30/circlator_1.5.1-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.