[Debian-med-packaging] Bug#895502: libsmithwaterman FTBFS on 32bit: missing symbol

Adrian Bunk bunk at debian.org
Thu Apr 12 06:55:06 BST 2018


Source: libsmithwaterman
Version: 0.0+git20160702.2610e25-1
Severity: serious

https://buildd.debian.org/status/package.php?p=libsmithwaterman&suite=sid

...
   dh_makeshlibs -a -O--no-parallel
dpkg-gensymbols: warning: some symbols or patterns disappeared in the symbols file: see diff output below
dpkg-gensymbols: warning: debian/libsmithwaterman0/DEBIAN/symbols doesn't match completely debian/libsmithwaterman0.symbols
--- debian/libsmithwaterman0.symbols (libsmithwaterman0_0.0+git20160702.2610e25-1_armel)
+++ dpkg-gensymbolsbf8gA7	2018-04-11 13:29:25.035300351 +0000
@@ -69,7 +69,7 @@
  _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev at Base 0.0+git20160702.2610e25
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE12_M_erase_auxESt23_Rb_tree_const_iteratorIS8_E at Base 0.0+git20160702.2610e25
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_ at Base 0.0+git20160702.2610e25
- _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 0.0+git20160702.2610e25
+#MISSING: 0.0+git20160702.2610e25-1# _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 0.0+git20160702.2610e25
  _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E at Base 0.0+git20160702.2610e25
  _ZeqRK11IndelAlleleS1_ at Base 0.0+git20160702.2610e25
  _ZlsRSoRK11IndelAllele at Base 0.0+git20160702.2610e25
dh_makeshlibs: failing due to earlier errors
debian/rules:8: recipe for target 'binary-arch' failed
make: *** [binary-arch] Error 2



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